Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm7791-201ENSMUST00000219066 539 ntBASIC14.27□□□□□ -0.13
Sf3b6P59708 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.27□□□□□ -0.13
Sf3b6P59708 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Sf3b6P59708 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.27□□□□□ -0.13
Sf3b6P59708 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.27□□□□□ -0.13
Sf3b6P59708 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.27□□□□□ -0.13
Sf3b6P59708 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sf3b6P59708 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.26□□□□□ -0.13
Sf3b6P59708 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Sf3b6P59708 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sf3b6P59708 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.25□□□□□ -0.13
Sf3b6P59708 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Sf3b6P59708 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Sf3b6P59708 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Mir6982-201ENSMUST00000184354 68 ntBASIC14.25□□□□□ -0.13
Sf3b6P59708 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sf3b6P59708 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.25□□□□□ -0.13
Sf3b6P59708 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sf3b6P59708 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.25□□□□□ -0.13
Sf3b6P59708 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.25□□□□□ -0.13
Sf3b6P59708 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sf3b6P59708 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.24□□□□□ -0.13
Sf3b6P59708 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Gm44450-201ENSMUST00000199528 114 ntBASIC14.24□□□□□ -0.13
Sf3b6P59708 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Timm23-208ENSMUST00000226683 750 ntBASIC14.24□□□□□ -0.13
Sf3b6P59708 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Sf3b6P59708 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Sf3b6P59708 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sf3b6P59708 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.23□□□□□ -0.13
Sf3b6P59708 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sf3b6P59708 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms