Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Tpm1P58771 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.94■□□□□ 0.46
Tpm1P58771 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tpm1P58771 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tpm1P58771 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tpm1P58771 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tpm1P58771 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tpm1P58771 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tpm1P58771 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tpm1P58771 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Tpm1P58771 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.93■□□□□ 0.46
Tpm1P58771 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.93■□□□□ 0.46
Tpm1P58771 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.93■□□□□ 0.46
Tpm1P58771 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.93■□□□□ 0.46
Tpm1P58771 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tpm1P58771 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tpm1P58771 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Tpm1P58771 Actl10-202ENSMUST00000226583 1501 ntBASIC17.93■□□□□ 0.46
Tpm1P58771 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Tpm1P58771 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.92■□□□□ 0.46
Tpm1P58771 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.92■□□□□ 0.46
Tpm1P58771 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tpm1P58771 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.92■□□□□ 0.46
Tpm1P58771 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.91■□□□□ 0.46
Tpm1P58771 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.91■□□□□ 0.46
Tpm1P58771 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.91■□□□□ 0.46
Tpm1P58771 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.91■□□□□ 0.46
Tpm1P58771 Gm7791-201ENSMUST00000219066 539 ntBASIC17.91■□□□□ 0.46
Tpm1P58771 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tpm1P58771 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Tpm1P58771 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tpm1P58771 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Tpm1P58771 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.9■□□□□ 0.46
Tpm1P58771 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Gm10698-201ENSMUST00000182663 604 ntBASIC17.9■□□□□ 0.46
Tpm1P58771 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.9■□□□□ 0.46
Tpm1P58771 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Tpm1P58771 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms