Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.61□□□□□ -0.39
Ctdsp1P58466 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.61□□□□□ -0.39
Ctdsp1P58466 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.61□□□□□ -0.39
Ctdsp1P58466 Zfp783-201ENSMUST00000095946 670 ntBASIC12.61□□□□□ -0.39
Ctdsp1P58466 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ctdsp1P58466 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 BC037039-201ENSMUST00000192003 2205 ntBASIC12.61□□□□□ -0.39
Ctdsp1P58466 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.61□□□□□ -0.39
Ctdsp1P58466 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ctdsp1P58466 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.6□□□□□ -0.39
Ctdsp1P58466 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.6□□□□□ -0.39
Ctdsp1P58466 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ctdsp1P58466 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Gm43173-201ENSMUST00000202246 593 ntBASIC12.59□□□□□ -0.39
Ctdsp1P58466 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.59□□□□□ -0.39
Ctdsp1P58466 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ctdsp1P58466 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ctdsp1P58466 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms