Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Mmp20P57748 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp20P57748 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp20P57748 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp20P57748 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp20P57748 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.32■□□□□ 0.52
Mmp20P57748 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp20P57748 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mmp20P57748 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Mmp20P57748 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.31■□□□□ 0.52
Mmp20P57748 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Gm7787-201ENSMUST00000216858 688 ntBASIC18.31■□□□□ 0.52
Mmp20P57748 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.31■□□□□ 0.52
Mmp20P57748 Rarb-207ENSMUST00000225921 2756 ntBASIC18.31■□□□□ 0.52
Mmp20P57748 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mmp20P57748 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Mmp20P57748 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Gm14701-201ENSMUST00000117156 348 ntBASIC18.3■□□□□ 0.52
Mmp20P57748 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.3■□□□□ 0.52
Mmp20P57748 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.3■□□□□ 0.52
Mmp20P57748 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.3■□□□□ 0.52
Mmp20P57748 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.3■□□□□ 0.52
Mmp20P57748 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mmp20P57748 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.29■□□□□ 0.52
Mmp20P57748 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp20P57748 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.29■□□□□ 0.52
Mmp20P57748 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Mmp20P57748 Gm11025-201ENSMUST00000140773 466 ntBASIC18.29■□□□□ 0.52
Mmp20P57748 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Gm44492-201ENSMUST00000197012 141 ntBASIC18.29■□□□□ 0.52
Mmp20P57748 Gm9682-201ENSMUST00000197505 556 ntBASIC18.29■□□□□ 0.52
Mmp20P57748 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.29■□□□□ 0.52
Mmp20P57748 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Mmp20P57748 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp20P57748 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp20P57748 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.28■□□□□ 0.52
Mmp20P57748 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Mmp20P57748 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mmp20P57748 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.28■□□□□ 0.52
Mmp20P57748 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.28■□□□□ 0.52
Mmp20P57748 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.28■□□□□ 0.52
Mmp20P57748 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Mmp20P57748 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Mmp20P57748 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.28■□□□□ 0.52
Mmp20P57748 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.28■□□□□ 0.52
Mmp20P57748 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.28■□□□□ 0.52
Mmp20P57748 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp20P57748 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mmp20P57748 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mmp20P57748 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp20P57748 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms