Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Msh6P54276 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Msh6P54276 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh6P54276 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Msh6P54276 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.23■□□□□ 0.83
Msh6P54276 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Msh6P54276 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.23■□□□□ 0.83
Msh6P54276 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Msh6P54276 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.23■□□□□ 0.83
Msh6P54276 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh6P54276 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.23■□□□□ 0.83
Msh6P54276 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.22■□□□□ 0.83
Msh6P54276 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.22■□□□□ 0.83
Msh6P54276 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh6P54276 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.21■□□□□ 0.83
Msh6P54276 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Msh6P54276 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.21■□□□□ 0.83
Msh6P54276 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.21■□□□□ 0.83
Msh6P54276 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.21■□□□□ 0.83
Msh6P54276 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Msh6P54276 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh6P54276 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Msh6P54276 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.21■□□□□ 0.83
Msh6P54276 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Msh6P54276 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Msh6P54276 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.83
Msh6P54276 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh6P54276 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh6P54276 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Msh6P54276 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Msh6P54276 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh6P54276 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh6P54276 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
Msh6P54276 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Msh6P54276 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.2■□□□□ 0.82
Msh6P54276 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Msh6P54276 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh6P54276 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Msh6P54276 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Msh6P54276 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Msh6P54276 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.19■□□□□ 0.82
Msh6P54276 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.19■□□□□ 0.82
Msh6P54276 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh6P54276 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Msh6P54276 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms