Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm27359-201ENSMUST00000184153 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm27785-201ENSMUST00000184268 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm27466-201ENSMUST00000184396 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm27703-201ENSMUST00000184836 110 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Gm6007-201ENSMUST00000208170 823 ntBASIC16.36■□□□□ 0.21
Sox1P53783 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.36■□□□□ 0.21
Sox1P53783 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sox1P53783 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.36■□□□□ 0.21
Sox1P53783 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sox1P53783 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sox1P53783 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.36■□□□□ 0.21
Sox1P53783 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.35■□□□□ 0.21
Sox1P53783 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Sox1P53783 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.35■□□□□ 0.21
Sox1P53783 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.35■□□□□ 0.21
Sox1P53783 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.35■□□□□ 0.21
Sox1P53783 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Gm27989-201ENSMUST00000184721 107 ntBASIC16.35■□□□□ 0.21
Sox1P53783 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.35■□□□□ 0.21
Sox1P53783 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox1P53783 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sox1P53783 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.35■□□□□ 0.21
Sox1P53783 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Sox1P53783 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sox1P53783 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.34■□□□□ 0.21
Sox1P53783 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.34■□□□□ 0.21
Sox1P53783 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.34■□□□□ 0.21
Sox1P53783 Gm27306-201ENSMUST00000183970 107 ntBASIC16.34■□□□□ 0.21
Sox1P53783 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.34■□□□□ 0.21
Sox1P53783 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Gm5779-201ENSMUST00000218467 910 ntBASIC16.34■□□□□ 0.21
Sox1P53783 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.34■□□□□ 0.21
Sox1P53783 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sox1P53783 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sox1P53783 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sox1P53783 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.33■□□□□ 0.21
Sox1P53783 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox1P53783 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sox1P53783 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox1P53783 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox1P53783 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.33■□□□□ 0.2
Sox1P53783 Mir7085-201ENSMUST00000184353 66 ntBASIC16.33■□□□□ 0.2
Sox1P53783 Gm38294-201ENSMUST00000192831 381 ntBASIC16.33■□□□□ 0.2
Sox1P53783 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.33■□□□□ 0.2
Sox1P53783 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sox1P53783 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sox1P53783 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sox1P53783 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.33■□□□□ 0.2
Sox1P53783 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.33■□□□□ 0.2
Sox1P53783 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox1P53783 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sox1P53783 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sox1P53783 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox1P53783 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.32■□□□□ 0.2
Sox1P53783 Gm24158-201ENSMUST00000175263 71 ntBASIC16.32■□□□□ 0.2
Sox1P53783 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms