Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Hmga2P52927 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.67□□□□□ -0.22
Hmga2P52927 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmga2P52927 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmga2P52927 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmga2P52927 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmga2P52927 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hmga2P52927 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Gm29707-201ENSMUST00000196325 491 ntBASIC13.66□□□□□ -0.22
Hmga2P52927 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.66□□□□□ -0.22
Hmga2P52927 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.66□□□□□ -0.22
Hmga2P52927 Odf3b-204ENSMUST00000227834 930 ntBASIC13.66□□□□□ -0.22
Hmga2P52927 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmga2P52927 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmga2P52927 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.65□□□□□ -0.22
Hmga2P52927 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.65□□□□□ -0.22
Hmga2P52927 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hmga2P52927 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.65□□□□□ -0.22
Hmga2P52927 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.65□□□□□ -0.22
Hmga2P52927 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.65□□□□□ -0.22
Hmga2P52927 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.65□□□□□ -0.22
Hmga2P52927 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.65□□□□□ -0.22
Hmga2P52927 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hmga2P52927 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmga2P52927 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hmga2P52927 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hmga2P52927 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
Hmga2P52927 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.64□□□□□ -0.23
Hmga2P52927 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmga2P52927 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms