Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Nek1P51954 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.91■□□□□ 0.46
Nek1P51954 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nek1P51954 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.91■□□□□ 0.46
Nek1P51954 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.91■□□□□ 0.46
Nek1P51954 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nek1P51954 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.9■□□□□ 0.46
Nek1P51954 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Nek1P51954 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.9■□□□□ 0.46
Nek1P51954 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Nek1P51954 Gm29518-201ENSMUST00000190858 372 ntBASIC17.9■□□□□ 0.46
Nek1P51954 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nek1P51954 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.9■□□□□ 0.46
Nek1P51954 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nek1P51954 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nek1P51954 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.89■□□□□ 0.46
Nek1P51954 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nek1P51954 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nek1P51954 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nek1P51954 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Mir1668-201ENSMUST00000184114 107 ntBASIC17.89■□□□□ 0.45
Nek1P51954 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Nek1P51954 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek1P51954 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nek1P51954 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.88■□□□□ 0.45
Nek1P51954 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.88■□□□□ 0.45
Nek1P51954 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.88■□□□□ 0.45
Nek1P51954 Gm17808-201ENSMUST00000200859 894 ntBASIC17.88■□□□□ 0.45
Nek1P51954 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.88■□□□□ 0.45
Nek1P51954 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nek1P51954 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Nek1P51954 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek1P51954 App-207ENSMUST00000227737 2827 ntBASIC17.87■□□□□ 0.45
Nek1P51954 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nek1P51954 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek1P51954 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms