Protein–RNA interactions for Protein: P51678

Ccr3, Probable C-C chemokine receptor type 3, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr3P51678 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.54■□□□□ 0.08
Ccr3P51678 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Ccr3P51678 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccr3P51678 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccr3P51678 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccr3P51678 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccr3P51678 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccr3P51678 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccr3P51678 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccr3P51678 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ccr3P51678 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccr3P51678 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccr3P51678 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccr3P51678 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccr3P51678 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccr3P51678 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccr3P51678 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Ccr3P51678 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccr3P51678 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ccr3P51678 Birc2-201ENSMUST00000054878 378 ntBASIC15.53■□□□□ 0.08
Ccr3P51678 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccr3P51678 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccr3P51678 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Ccr3P51678 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccr3P51678 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccr3P51678 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ccr3P51678 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ccr3P51678 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.52■□□□□ 0.08
Ccr3P51678 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ccr3P51678 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Ccr3P51678 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ccr3P51678 Mir6404-201ENSMUST00000183699 94 ntBASIC15.52■□□□□ 0.08
Ccr3P51678 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccr3P51678 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ccr3P51678 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccr3P51678 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccr3P51678 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ccr3P51678 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccr3P51678 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccr3P51678 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccr3P51678 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccr3P51678 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ccr3P51678 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.51■□□□□ 0.07
Ccr3P51678 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Gm25745-201ENSMUST00000174945 133 ntBASIC15.51■□□□□ 0.07
Ccr3P51678 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Ccr3P51678 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.51■□□□□ 0.07
Ccr3P51678 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.51■□□□□ 0.07
Ccr3P51678 Gm43347-201ENSMUST00000200226 580 ntBASIC15.51■□□□□ 0.07
Ccr3P51678 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Ccr3P51678 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccr3P51678 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.51■□□□□ 0.07
Ccr3P51678 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccr3P51678 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.5■□□□□ 0.07
Ccr3P51678 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccr3P51678 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccr3P51678 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ccr3P51678 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccr3P51678 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccr3P51678 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.5■□□□□ 0.07
Ccr3P51678 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.5■□□□□ 0.07
Ccr3P51678 Gm27741-201ENSMUST00000185060 237 ntBASIC15.5■□□□□ 0.07
Ccr3P51678 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.5■□□□□ 0.07
Ccr3P51678 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.5■□□□□ 0.07
Ccr3P51678 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccr3P51678 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms