Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx2-1P50220 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.34□□□□□ -0.27
Nkx2-1P50220 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.34□□□□□ -0.27
Nkx2-1P50220 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx2-1P50220 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.33□□□□□ -0.27
Nkx2-1P50220 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-1P50220 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-1P50220 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-1P50220 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.33□□□□□ -0.27
Nkx2-1P50220 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-1P50220 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-1P50220 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-1P50220 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx2-1P50220 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.33□□□□□ -0.28
Nkx2-1P50220 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx2-1P50220 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 App-207ENSMUST00000227737 2827 ntBASIC13.32□□□□□ -0.28
Nkx2-1P50220 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx2-1P50220 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Gm10653-202ENSMUST00000139570 835 ntBASIC13.32□□□□□ -0.28
Nkx2-1P50220 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Gm8520-201ENSMUST00000186517 868 ntBASIC13.32□□□□□ -0.28
Nkx2-1P50220 Gm43183-201ENSMUST00000200632 547 ntBASIC13.32□□□□□ -0.28
Nkx2-1P50220 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx2-1P50220 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms