Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
GdnfP48540 Gm27463-201ENSMUST00000183569 57 ntBASIC14.09□□□□□ -0.15
GdnfP48540 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.09□□□□□ -0.15
GdnfP48540 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
GdnfP48540 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.09□□□□□ -0.15
GdnfP48540 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GdnfP48540 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
GdnfP48540 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GdnfP48540 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.09□□□□□ -0.15
GdnfP48540 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
GdnfP48540 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GdnfP48540 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GdnfP48540 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GdnfP48540 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GdnfP48540 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GdnfP48540 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GdnfP48540 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.08□□□□□ -0.15
GdnfP48540 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GdnfP48540 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.08□□□□□ -0.16
GdnfP48540 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Gm43799-201ENSMUST00000201845 579 ntBASIC14.08□□□□□ -0.16
GdnfP48540 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.08□□□□□ -0.16
GdnfP48540 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.08□□□□□ -0.16
GdnfP48540 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.08□□□□□ -0.16
GdnfP48540 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GdnfP48540 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GdnfP48540 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GdnfP48540 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Gm13559-201ENSMUST00000120476 863 ntBASIC14.07□□□□□ -0.16
GdnfP48540 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
GdnfP48540 Gm27000-201ENSMUST00000182943 842 ntBASIC14.07□□□□□ -0.16
GdnfP48540 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GdnfP48540 Gm37444-201ENSMUST00000193605 439 ntBASIC14.07□□□□□ -0.16
GdnfP48540 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GdnfP48540 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.07□□□□□ -0.16
GdnfP48540 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
GdnfP48540 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GdnfP48540 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
GdnfP48540 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.06□□□□□ -0.16
GdnfP48540 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.06□□□□□ -0.16
GdnfP48540 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
GdnfP48540 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.06□□□□□ -0.16
GdnfP48540 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GdnfP48540 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
GdnfP48540 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
GdnfP48540 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GdnfP48540 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GdnfP48540 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms