Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gli1P47806 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Gli1P47806 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Gli1P47806 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.69■□□□□ 0.1
Gli1P47806 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Gm7638-201ENSMUST00000121348 967 ntBASIC15.69■□□□□ 0.1
Gli1P47806 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.69■□□□□ 0.1
Gli1P47806 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.69■□□□□ 0.1
Gli1P47806 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Gli1P47806 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Prob1-201ENSMUST00000097619 3021 ntBASIC15.69■□□□□ 0.1
Gli1P47806 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gli1P47806 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Gli1P47806 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.68■□□□□ 0.1
Gli1P47806 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Gli1P47806 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Gli1P47806 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gli1P47806 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Gli1P47806 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.68■□□□□ 0.1
Gli1P47806 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.68■□□□□ 0.1
Gli1P47806 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.68■□□□□ 0.1
Gli1P47806 Gm21559-201ENSMUST00000220638 855 ntBASIC15.68■□□□□ 0.1
Gli1P47806 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Gm8587-201ENSMUST00000076538 843 ntBASIC15.68■□□□□ 0.1
Gli1P47806 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Gli1P47806 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.68■□□□□ 0.1
Gli1P47806 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gli1P47806 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.67■□□□□ 0.1
Gli1P47806 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Gli1P47806 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Gli1P47806 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.67■□□□□ 0.1
Gli1P47806 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gli1P47806 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gli1P47806 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Gli1P47806 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Gli1P47806 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.66■□□□□ 0.1
Gli1P47806 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gli1P47806 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.66■□□□□ 0.1
Gli1P47806 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.66■□□□□ 0.1
Gli1P47806 Gm5587-201ENSMUST00000206270 674 ntBASIC15.66■□□□□ 0.1
Gli1P47806 Gm7791-201ENSMUST00000219066 539 ntBASIC15.66■□□□□ 0.1
Gli1P47806 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli1P47806 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms