Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC15.35■□□□□ 0.05
Sox18P43680 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.35■□□□□ 0.05
Sox18P43680 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.35■□□□□ 0.05
Sox18P43680 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.35■□□□□ 0.05
Sox18P43680 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sox18P43680 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sox18P43680 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox18P43680 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Sox18P43680 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox18P43680 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.34■□□□□ 0.05
Sox18P43680 Gm28196-201ENSMUST00000187719 640 ntBASIC15.34■□□□□ 0.05
Sox18P43680 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.34■□□□□ 0.05
Sox18P43680 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sox18P43680 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sox18P43680 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox18P43680 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Sox18P43680 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sox18P43680 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox18P43680 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox18P43680 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sox18P43680 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox18P43680 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sox18P43680 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox18P43680 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Gm11764-201ENSMUST00000120221 623 ntBASIC15.33■□□□□ 0.04
Sox18P43680 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.33■□□□□ 0.04
Sox18P43680 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Sox18P43680 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.33■□□□□ 0.04
Sox18P43680 Gm9172-201ENSMUST00000212092 954 ntBASIC15.33■□□□□ 0.04
Sox18P43680 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.33■□□□□ 0.04
Sox18P43680 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Sox18P43680 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.33■□□□□ 0.04
Sox18P43680 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.33■□□□□ 0.04
Sox18P43680 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox18P43680 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox18P43680 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox18P43680 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Sox18P43680 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.32■□□□□ 0.04
Sox18P43680 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox18P43680 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox18P43680 Gm44882-201ENSMUST00000205702 802 ntBASIC15.32■□□□□ 0.04
Sox18P43680 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.32■□□□□ 0.04
Sox18P43680 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox18P43680 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sox18P43680 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox18P43680 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox18P43680 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms