Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx2P43241 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.2■□□□□ 0.02
Cdx2P43241 Gm15920-201ENSMUST00000118998 402 ntBASIC15.2■□□□□ 0.02
Cdx2P43241 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx2P43241 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.2■□□□□ 0.02
Cdx2P43241 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.2■□□□□ 0.02
Cdx2P43241 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx2P43241 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx2P43241 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx2P43241 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdx2P43241 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx2P43241 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdx2P43241 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Gm14701-201ENSMUST00000117156 348 ntBASIC15.19■□□□□ 0.02
Cdx2P43241 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.19■□□□□ 0.02
Cdx2P43241 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdx2P43241 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdx2P43241 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdx2P43241 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdx2P43241 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdx2P43241 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Cdx2P43241 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdx2P43241 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdx2P43241 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdx2P43241 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.18■□□□□ 0.02
Cdx2P43241 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.18■□□□□ 0.02
Cdx2P43241 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.18■□□□□ 0.02
Cdx2P43241 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdx2P43241 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdx2P43241 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cdx2P43241 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Cdx2P43241 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdx2P43241 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdx2P43241 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.17■□□□□ 0.02
Cdx2P43241 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdx2P43241 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdx2P43241 Gm15358-201ENSMUST00000119249 520 ntBASIC15.17■□□□□ 0.02
Cdx2P43241 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdx2P43241 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cdx2P43241 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdx2P43241 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms