Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Cd27P41272 Rprl3-201ENSMUST00000157400 290 ntBASIC12.85□□□□□ -0.35
Cd27P41272 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Cd27P41272 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.85□□□□□ -0.35
Cd27P41272 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.85□□□□□ -0.35
Cd27P41272 Gm44454-201ENSMUST00000198541 138 ntBASIC12.85□□□□□ -0.35
Cd27P41272 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cd27P41272 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cd27P41272 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cd27P41272 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.85□□□□□ -0.35
Cd27P41272 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.84□□□□□ -0.35
Cd27P41272 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cd27P41272 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.84□□□□□ -0.35
Cd27P41272 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Cd27P41272 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Cd27P41272 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.84□□□□□ -0.35
Cd27P41272 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd27P41272 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Cd27P41272 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd27P41272 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd27P41272 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd27P41272 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd27P41272 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd27P41272 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd27P41272 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Dancr-204ENSMUST00000132389 2347 ntBASIC12.83□□□□□ -0.36
Cd27P41272 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cd27P41272 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.83□□□□□ -0.36
Cd27P41272 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Gm15165-201ENSMUST00000118140 502 ntBASIC12.83□□□□□ -0.36
Cd27P41272 Gm15372-201ENSMUST00000120729 834 ntBASIC12.83□□□□□ -0.36
Cd27P41272 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.83□□□□□ -0.36
Cd27P41272 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.83□□□□□ -0.36
Cd27P41272 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cd27P41272 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cd27P41272 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd27P41272 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd27P41272 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cd27P41272 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd27P41272 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd27P41272 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.82□□□□□ -0.36
Cd27P41272 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.82□□□□□ -0.36
Cd27P41272 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.82□□□□□ -0.36
Cd27P41272 Gm25406-201ENSMUST00000157599 105 ntBASIC12.82□□□□□ -0.36
Cd27P41272 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd27P41272 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.82□□□□□ -0.36
Cd27P41272 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.82□□□□□ -0.36
Cd27P41272 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms