Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Sox6P40645 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Sox6P40645 Gm7370-201ENSMUST00000219471 767 ntBASIC15.1■□□□□ 0.01
Sox6P40645 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.1■□□□□ 0.01
Sox6P40645 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Sox6P40645 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox6P40645 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Sox6P40645 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.09■□□□□ 0.01
Sox6P40645 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Sox6P40645 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.09■□□□□ 0.01
Sox6P40645 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Sox6P40645 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox6P40645 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox6P40645 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sox6P40645 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sox6P40645 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.08■□□□□ 0
Sox6P40645 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.08■□□□□ 0
Sox6P40645 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox6P40645 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms