Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VhlP40338 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VhlP40338 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VhlP40338 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VhlP40338 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
VhlP40338 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VhlP40338 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
VhlP40338 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.19□□□□□ -0.3
VhlP40338 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.19□□□□□ -0.3
VhlP40338 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Gm8520-201ENSMUST00000186517 868 ntBASIC13.19□□□□□ -0.3
VhlP40338 Gm44450-201ENSMUST00000199528 114 ntBASIC13.19□□□□□ -0.3
VhlP40338 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.19□□□□□ -0.3
VhlP40338 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.19□□□□□ -0.3
VhlP40338 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.19□□□□□ -0.3
VhlP40338 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.19□□□□□ -0.3
VhlP40338 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VhlP40338 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
VhlP40338 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Gm13168-201ENSMUST00000121771 632 ntBASIC13.18□□□□□ -0.3
VhlP40338 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.18□□□□□ -0.3
VhlP40338 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.18□□□□□ -0.3
VhlP40338 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VhlP40338 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VhlP40338 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VhlP40338 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VhlP40338 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.17□□□□□ -0.3
VhlP40338 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Odf3b-204ENSMUST00000227834 930 ntBASIC13.17□□□□□ -0.3
VhlP40338 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
VhlP40338 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VhlP40338 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VhlP40338 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VhlP40338 App-207ENSMUST00000227737 2827 ntBASIC13.16□□□□□ -0.3
VhlP40338 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms