Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd9P40240 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cd9P40240 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cd9P40240 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd9P40240 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd9P40240 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cd9P40240 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.81■□□□□ 0.12
Cd9P40240 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Cd9P40240 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cd9P40240 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cd9P40240 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.81■□□□□ 0.12
Cd9P40240 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cd9P40240 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cd9P40240 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cd9P40240 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cd9P40240 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cd9P40240 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cd9P40240 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cd9P40240 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Gm27357-201ENSMUST00000183754 135 ntBASIC15.8■□□□□ 0.12
Cd9P40240 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Cd9P40240 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.8■□□□□ 0.12
Cd9P40240 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cd9P40240 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Cd9P40240 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cd9P40240 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cd9P40240 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cd9P40240 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Cd9P40240 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cd9P40240 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.79■□□□□ 0.12
Cd9P40240 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cd9P40240 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cd9P40240 Gm15372-201ENSMUST00000120729 834 ntBASIC15.79■□□□□ 0.12
Cd9P40240 Gm33142-201ENSMUST00000193913 867 ntBASIC15.79■□□□□ 0.12
Cd9P40240 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.79■□□□□ 0.12
Cd9P40240 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cd9P40240 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cd9P40240 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.78■□□□□ 0.12
Cd9P40240 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cd9P40240 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cd9P40240 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.78■□□□□ 0.12
Cd9P40240 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.78■□□□□ 0.12
Cd9P40240 Gm9172-201ENSMUST00000212092 954 ntBASIC15.78■□□□□ 0.12
Cd9P40240 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.78■□□□□ 0.12
Cd9P40240 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cd9P40240 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms