Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cxcl12P40224 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.5■□□□□ 0.23
Cxcl12P40224 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Rprl2-201ENSMUST00000157150 290 ntBASIC16.5■□□□□ 0.23
Cxcl12P40224 Gm22175-201ENSMUST00000175007 78 ntBASIC16.5■□□□□ 0.23
Cxcl12P40224 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Gm5177-201ENSMUST00000183092 997 ntBASIC16.5■□□□□ 0.23
Cxcl12P40224 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.5■□□□□ 0.23
Cxcl12P40224 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.5■□□□□ 0.23
Cxcl12P40224 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.5■□□□□ 0.23
Cxcl12P40224 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cxcl12P40224 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.5■□□□□ 0.23
Cxcl12P40224 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cxcl12P40224 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cxcl12P40224 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Cxcl12P40224 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.49■□□□□ 0.23
Cxcl12P40224 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cxcl12P40224 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.49■□□□□ 0.23
Cxcl12P40224 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Cxcl12P40224 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.49■□□□□ 0.23
Cxcl12P40224 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cxcl12P40224 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cxcl12P40224 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Gm27430-201ENSMUST00000184585 107 ntBASIC16.48■□□□□ 0.23
Cxcl12P40224 Mir6977-201ENSMUST00000184960 64 ntBASIC16.48■□□□□ 0.23
Cxcl12P40224 Gm44333-201ENSMUST00000197168 107 ntBASIC16.48■□□□□ 0.23
Cxcl12P40224 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cxcl12P40224 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cxcl12P40224 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cxcl12P40224 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.47■□□□□ 0.23
Cxcl12P40224 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.47■□□□□ 0.23
Cxcl12P40224 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.47■□□□□ 0.23
Cxcl12P40224 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.47■□□□□ 0.23
Cxcl12P40224 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.47■□□□□ 0.23
Cxcl12P40224 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.47■□□□□ 0.23
Cxcl12P40224 Gm18889-201ENSMUST00000174284 929 ntBASIC16.47■□□□□ 0.23
Cxcl12P40224 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.47■□□□□ 0.23
Cxcl12P40224 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.47■□□□□ 0.23
Cxcl12P40224 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cxcl12P40224 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cxcl12P40224 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms