Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Timp3P39876 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.15□□□□□ -0.3
Timp3P39876 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Timp3P39876 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.15□□□□□ -0.3
Timp3P39876 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.15□□□□□ -0.3
Timp3P39876 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Timp3P39876 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Timp3P39876 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Timp3P39876 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Timp3P39876 Gm34391-201ENSMUST00000203706 907 ntBASIC13.14□□□□□ -0.31
Timp3P39876 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Timp3P39876 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Timp3P39876 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Timp3P39876 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Timp3P39876 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.13□□□□□ -0.31
Timp3P39876 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 Gm13312-201ENSMUST00000119631 718 ntBASIC13.13□□□□□ -0.31
Timp3P39876 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.13□□□□□ -0.31
Timp3P39876 Gm10052-201ENSMUST00000168019 960 ntBASIC13.13□□□□□ -0.31
Timp3P39876 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.13□□□□□ -0.31
Timp3P39876 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Gm28659-201ENSMUST00000188013 759 ntBASIC13.13□□□□□ -0.31
Timp3P39876 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.13□□□□□ -0.31
Timp3P39876 Gm7729-201ENSMUST00000050143 801 ntBASIC13.13□□□□□ -0.31
Timp3P39876 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.13□□□□□ -0.31
Timp3P39876 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Timp3P39876 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Timp3P39876 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Timp3P39876 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Timp3P39876 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.12□□□□□ -0.31
Timp3P39876 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.12□□□□□ -0.31
Timp3P39876 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.12□□□□□ -0.31
Timp3P39876 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.12□□□□□ -0.31
Timp3P39876 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Timp3P39876 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms