Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HmgclP38060 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.82■□□□□ 0.12
HmgclP38060 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.82■□□□□ 0.12
HmgclP38060 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HmgclP38060 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HmgclP38060 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HmgclP38060 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HmgclP38060 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HmgclP38060 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.81■□□□□ 0.12
HmgclP38060 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HmgclP38060 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.81■□□□□ 0.12
HmgclP38060 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HmgclP38060 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HmgclP38060 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Gm14859-201ENSMUST00000117752 357 ntBASIC15.8■□□□□ 0.12
HmgclP38060 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.8■□□□□ 0.12
HmgclP38060 Gm27357-201ENSMUST00000183754 135 ntBASIC15.8■□□□□ 0.12
HmgclP38060 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.8■□□□□ 0.12
HmgclP38060 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HmgclP38060 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HmgclP38060 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
HmgclP38060 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.79■□□□□ 0.12
HmgclP38060 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.79■□□□□ 0.12
HmgclP38060 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.79■□□□□ 0.12
HmgclP38060 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HmgclP38060 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.79■□□□□ 0.12
HmgclP38060 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HmgclP38060 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
HmgclP38060 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
HmgclP38060 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.78■□□□□ 0.12
HmgclP38060 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.78■□□□□ 0.12
HmgclP38060 Gm44454-201ENSMUST00000198541 138 ntBASIC15.78■□□□□ 0.12
HmgclP38060 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.78■□□□□ 0.12
HmgclP38060 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HmgclP38060 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HmgclP38060 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms