Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Gm7638-201ENSMUST00000121348 967 ntBASIC12.74□□□□□ -0.37
Rom1P32958 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Rom1P32958 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.74□□□□□ -0.37
Rom1P32958 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rom1P32958 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rom1P32958 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rom1P32958 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rom1P32958 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.73□□□□□ -0.37
Rom1P32958 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.73□□□□□ -0.37
Rom1P32958 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rom1P32958 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.73□□□□□ -0.37
Rom1P32958 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.73□□□□□ -0.37
Rom1P32958 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Gm42569-201ENSMUST00000200539 472 ntBASIC12.73□□□□□ -0.37
Rom1P32958 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.73□□□□□ -0.37
Rom1P32958 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Rom1P32958 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rom1P32958 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.73□□□□□ -0.37
Rom1P32958 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Rom1P32958 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rom1P32958 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rom1P32958 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rom1P32958 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Rom1P32958 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rom1P32958 Gm43183-201ENSMUST00000200632 547 ntBASIC12.72□□□□□ -0.37
Rom1P32958 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rom1P32958 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rom1P32958 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.72□□□□□ -0.37
Rom1P32958 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rom1P32958 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rom1P32958 App-207ENSMUST00000227737 2827 ntBASIC12.71□□□□□ -0.37
Rom1P32958 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Rom1P32958 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rom1P32958 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rom1P32958 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rom1P32958 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rom1P32958 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rom1P32958 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rom1P32958 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rom1P32958 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rom1P32958 Gm36967-201ENSMUST00000193814 266 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms