Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Slc6a1P31648 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Slc6a1P31648 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a1P31648 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.84□□□□□ -0.19
Slc6a1P31648 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.84□□□□□ -0.19
Slc6a1P31648 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.84□□□□□ -0.19
Slc6a1P31648 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.84□□□□□ -0.19
Slc6a1P31648 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Gm15375-201ENSMUST00000119510 849 ntBASIC13.84□□□□□ -0.19
Slc6a1P31648 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Slc6a1P31648 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.84□□□□□ -0.19
Slc6a1P31648 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Slc6a1P31648 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Slc6a1P31648 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Slc6a1P31648 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Slc6a1P31648 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a1P31648 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a1P31648 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a1P31648 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a1P31648 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a1P31648 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Slc6a1P31648 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.83□□□□□ -0.2
Slc6a1P31648 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.83□□□□□ -0.2
Slc6a1P31648 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.83□□□□□ -0.2
Slc6a1P31648 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.83□□□□□ -0.2
Slc6a1P31648 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Slc6a1P31648 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.83□□□□□ -0.2
Slc6a1P31648 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a1P31648 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.83□□□□□ -0.2
Slc6a1P31648 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Slc6a1P31648 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.82□□□□□ -0.2
Slc6a1P31648 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.82□□□□□ -0.2
Slc6a1P31648 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.82□□□□□ -0.2
Slc6a1P31648 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.82□□□□□ -0.2
Slc6a1P31648 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Slc6a1P31648 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a1P31648 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Slc6a1P31648 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms