Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl6P27784 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl6P27784 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl6P27784 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl6P27784 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ccl6P27784 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl6P27784 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccl6P27784 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl6P27784 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Gm13836-201ENSMUST00000121159 501 ntBASIC12.53□□□□□ -0.4
Ccl6P27784 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccl6P27784 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.53□□□□□ -0.4
Ccl6P27784 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccl6P27784 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl6P27784 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl6P27784 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccl6P27784 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Ccl6P27784 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccl6P27784 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccl6P27784 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl6P27784 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccl6P27784 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Mir770-201ENSMUST00000103252 94 ntBASIC12.52□□□□□ -0.41
Ccl6P27784 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.52□□□□□ -0.41
Ccl6P27784 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccl6P27784 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccl6P27784 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccl6P27784 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl6P27784 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms