Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Cd40lgP27548 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.8□□□□□ -0.04
Cd40lgP27548 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cd40lgP27548 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.8□□□□□ -0.04
Cd40lgP27548 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Cd40lgP27548 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cd40lgP27548 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Cd40lgP27548 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cd40lgP27548 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.78□□□□□ -0.04
Cd40lgP27548 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.78□□□□□ -0.04
Cd40lgP27548 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.78□□□□□ -0.04
Cd40lgP27548 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.78□□□□□ -0.04
Cd40lgP27548 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Cd40lgP27548 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cd40lgP27548 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cd40lgP27548 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.78□□□□□ -0.04
Cd40lgP27548 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40lgP27548 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cd40lgP27548 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cd40lgP27548 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40lgP27548 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.77□□□□□ -0.05
Cd40lgP27548 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cd40lgP27548 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cd40lgP27548 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40lgP27548 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cd40lgP27548 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40lgP27548 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms