Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40P27512 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40P27512 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40P27512 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd40P27512 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Cd40P27512 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cd40P27512 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cd40P27512 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40P27512 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40P27512 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40P27512 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40P27512 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd40P27512 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.52□□□□□ -0.09
Cd40P27512 Gm21362-201ENSMUST00000194272 928 ntBASIC14.52□□□□□ -0.09
Cd40P27512 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cd40P27512 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd40P27512 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd40P27512 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cd40P27512 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.51□□□□□ -0.09
Cd40P27512 Gm15372-201ENSMUST00000120729 834 ntBASIC14.51□□□□□ -0.09
Cd40P27512 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cd40P27512 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cd40P27512 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cd40P27512 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.51□□□□□ -0.09
Cd40P27512 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.51□□□□□ -0.09
Cd40P27512 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd40P27512 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cd40P27512 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cd40P27512 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.51□□□□□ -0.09
Cd40P27512 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.51□□□□□ -0.09
Cd40P27512 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd40P27512 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.5□□□□□ -0.09
Cd40P27512 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cd40P27512 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cd40P27512 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cd40P27512 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.5□□□□□ -0.09
Cd40P27512 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.5□□□□□ -0.09
Cd40P27512 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cd40P27512 Gm18669-201ENSMUST00000216049 778 ntBASIC14.5□□□□□ -0.09
Cd40P27512 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.5□□□□□ -0.09
Cd40P27512 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.5□□□□□ -0.09
Cd40P27512 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.5□□□□□ -0.09
Cd40P27512 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd40P27512 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cd40P27512 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40P27512 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40P27512 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40P27512 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40P27512 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40P27512 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cd40P27512 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.49□□□□□ -0.09
Cd40P27512 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd40P27512 Gm25406-201ENSMUST00000157599 105 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms