Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.39□□□□□ -0.27
Col8a2P25318 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col8a2P25318 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col8a2P25318 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col8a2P25318 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col8a2P25318 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.38□□□□□ -0.27
Col8a2P25318 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.38□□□□□ -0.27
Col8a2P25318 Mir8098-201ENSMUST00000184011 137 ntBASIC13.38□□□□□ -0.27
Col8a2P25318 Gm28659-201ENSMUST00000188013 759 ntBASIC13.38□□□□□ -0.27
Col8a2P25318 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.38□□□□□ -0.27
Col8a2P25318 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.38□□□□□ -0.27
Col8a2P25318 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col8a2P25318 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col8a2P25318 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Col8a2P25318 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col8a2P25318 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.37□□□□□ -0.27
Col8a2P25318 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Col8a2P25318 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col8a2P25318 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.37□□□□□ -0.27
Col8a2P25318 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col8a2P25318 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.37□□□□□ -0.27
Col8a2P25318 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col8a2P25318 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col8a2P25318 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col8a2P25318 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Col8a2P25318 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.36□□□□□ -0.27
Col8a2P25318 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Col8a2P25318 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col8a2P25318 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Col8a2P25318 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col8a2P25318 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.36□□□□□ -0.27
Col8a2P25318 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col8a2P25318 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms