Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Gm12895-201ENSMUST00000122214 226 ntBASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf1bP25119 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfrsf1bP25119 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfrsf1bP25119 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfrsf1bP25119 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Tnfrsf1bP25119 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfrsf1bP25119 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfrsf1bP25119 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfrsf1bP25119 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfrsf1bP25119 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfrsf1bP25119 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms