Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P20040 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P20040 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
P20040 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
P20040 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
P20040 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Gm27000-201ENSMUST00000182943 842 ntBASIC14.28□□□□□ -0.12
P20040 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
P20040 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.28□□□□□ -0.12
P20040 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.28□□□□□ -0.12
P20040 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
P20040 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P20040 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P20040 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
P20040 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 AA414768-201ENSMUST00000121924 1257 ntBASIC14.27□□□□□ -0.13
P20040 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P20040 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
P20040 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.27□□□□□ -0.13
P20040 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.27□□□□□ -0.13
P20040 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
P20040 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P20040 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.27□□□□□ -0.13
P20040 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.27□□□□□ -0.13
P20040 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P20040 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P20040 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P20040 Actl10-202ENSMUST00000226583 1501 ntBASIC14.26□□□□□ -0.13
P20040 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P20040 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Gm26039-201ENSMUST00000158152 144 ntBASIC14.26□□□□□ -0.13
P20040 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.26□□□□□ -0.13
P20040 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.26□□□□□ -0.13
P20040 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
P20040 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P20040 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms