Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd44P15379 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd44P15379 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cd44P15379 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd44P15379 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cd44P15379 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cd44P15379 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd44P15379 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd44P15379 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd44P15379 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cd44P15379 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd44P15379 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd44P15379 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd44P15379 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Cd44P15379 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cd44P15379 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.86■□□□□ 0.29
Cd44P15379 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.86■□□□□ 0.29
Cd44P15379 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.86■□□□□ 0.29
Cd44P15379 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Cd44P15379 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.86■□□□□ 0.29
Cd44P15379 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.86■□□□□ 0.29
Cd44P15379 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.86■□□□□ 0.29
Cd44P15379 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cd44P15379 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd44P15379 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.86■□□□□ 0.29
Cd44P15379 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.85■□□□□ 0.29
Cd44P15379 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd44P15379 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd44P15379 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd44P15379 Gm7889-201ENSMUST00000185591 958 ntBASIC16.85■□□□□ 0.29
Cd44P15379 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cd44P15379 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd44P15379 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.85■□□□□ 0.29
Cd44P15379 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd44P15379 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd44P15379 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd44P15379 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cd44P15379 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cd44P15379 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cd44P15379 Mir5130-201ENSMUST00000175160 84 ntBASIC16.84■□□□□ 0.29
Cd44P15379 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.84■□□□□ 0.29
Cd44P15379 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.84■□□□□ 0.29
Cd44P15379 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cd44P15379 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.84■□□□□ 0.29
Cd44P15379 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd44P15379 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd44P15379 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms