Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gm8493-201ENSMUST00000196881 489 ntBASIC11.1□□□□□ -0.63
Smim1P0C8K7 Gm42778-201ENSMUST00000199644 553 ntBASIC11.1□□□□□ -0.63
Smim1P0C8K7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.1□□□□□ -0.63
Smim1P0C8K7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smim1P0C8K7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.09□□□□□ -0.63
Smim1P0C8K7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.09□□□□□ -0.63
Smim1P0C8K7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Gm26833-201ENSMUST00000180899 440 ntBASIC11.09□□□□□ -0.63
Smim1P0C8K7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smim1P0C8K7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Smim1P0C8K7 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.08□□□□□ -0.64
Smim1P0C8K7 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.08□□□□□ -0.64
Smim1P0C8K7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.08□□□□□ -0.64
Smim1P0C8K7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Smim1P0C8K7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smim1P0C8K7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.08□□□□□ -0.64
Smim1P0C8K7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms