Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.23■□□□□ 0.19
PdgfrbP05622 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.23■□□□□ 0.19
PdgfrbP05622 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PdgfrbP05622 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfrbP05622 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.22■□□□□ 0.19
PdgfrbP05622 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.22■□□□□ 0.19
PdgfrbP05622 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.22■□□□□ 0.19
PdgfrbP05622 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PdgfrbP05622 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.22■□□□□ 0.19
PdgfrbP05622 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.22■□□□□ 0.19
PdgfrbP05622 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.22■□□□□ 0.19
PdgfrbP05622 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PdgfrbP05622 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PdgfrbP05622 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfrbP05622 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.22■□□□□ 0.19
PdgfrbP05622 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.21■□□□□ 0.19
PdgfrbP05622 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PdgfrbP05622 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.21■□□□□ 0.19
PdgfrbP05622 Olfr129-201ENSMUST00000122318 993 ntBASIC16.21■□□□□ 0.19
PdgfrbP05622 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.21■□□□□ 0.19
PdgfrbP05622 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PdgfrbP05622 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.21■□□□□ 0.19
PdgfrbP05622 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PdgfrbP05622 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PdgfrbP05622 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PdgfrbP05622 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
PdgfrbP05622 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PdgfrbP05622 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PdgfrbP05622 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PdgfrbP05622 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
PdgfrbP05622 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PdgfrbP05622 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.2■□□□□ 0.18
PdgfrbP05622 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.2■□□□□ 0.18
PdgfrbP05622 Gm7977-201ENSMUST00000193787 748 ntBASIC16.2■□□□□ 0.18
PdgfrbP05622 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.2■□□□□ 0.18
PdgfrbP05622 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PdgfrbP05622 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms