Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Col4a1P02463 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.59■□□□□ 0.73
Col4a1P02463 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col4a1P02463 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col4a1P02463 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Gm14701-201ENSMUST00000117156 348 ntBASIC19.59■□□□□ 0.73
Col4a1P02463 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Gm20553-201ENSMUST00000204205 844 ntBASIC19.59■□□□□ 0.73
Col4a1P02463 Gm18246-201ENSMUST00000221023 728 ntBASIC19.59■□□□□ 0.73
Col4a1P02463 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a1P02463 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col4a1P02463 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a1P02463 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a1P02463 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Col4a1P02463 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a1P02463 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.58■□□□□ 0.73
Col4a1P02463 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a1P02463 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col4a1P02463 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.58■□□□□ 0.72
Col4a1P02463 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a1P02463 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Col4a1P02463 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a1P02463 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.58■□□□□ 0.72
Col4a1P02463 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Col4a1P02463 Gm19164-201ENSMUST00000210667 640 ntBASIC19.58■□□□□ 0.72
Col4a1P02463 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.58■□□□□ 0.72
Col4a1P02463 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a1P02463 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.57■□□□□ 0.72
Col4a1P02463 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Col4a1P02463 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.57■□□□□ 0.72
Col4a1P02463 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.57■□□□□ 0.72
Col4a1P02463 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.57■□□□□ 0.72
Col4a1P02463 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Haglr-201ENSMUST00000100000 2085 ntBASIC19.57■□□□□ 0.72
Col4a1P02463 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a1P02463 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.56■□□□□ 0.72
Col4a1P02463 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.56■□□□□ 0.72
Col4a1P02463 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.56■□□□□ 0.72
Col4a1P02463 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Gm45612-201ENSMUST00000211320 160 ntBASIC19.56■□□□□ 0.72
Col4a1P02463 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.56■□□□□ 0.72
Col4a1P02463 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col4a1P02463 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col4a1P02463 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col4a1P02463 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.55■□□□□ 0.72
Col4a1P02463 Gm44335-201ENSMUST00000196879 141 ntBASIC19.55■□□□□ 0.72
Col4a1P02463 Gm44297-201ENSMUST00000198304 141 ntBASIC19.55■□□□□ 0.72
Col4a1P02463 Gm44346-201ENSMUST00000198851 141 ntBASIC19.55■□□□□ 0.72
Col4a1P02463 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col4a1P02463 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms