Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
H3f3cP02301 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
H3f3cP02301 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H3f3cP02301 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.8□□□□□ -0.2
H3f3cP02301 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.79□□□□□ -0.2
H3f3cP02301 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.79□□□□□ -0.2
H3f3cP02301 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
H3f3cP02301 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.79□□□□□ -0.2
H3f3cP02301 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Gm10052-201ENSMUST00000168019 960 ntBASIC13.79□□□□□ -0.2
H3f3cP02301 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Gm7729-201ENSMUST00000050143 801 ntBASIC13.79□□□□□ -0.2
H3f3cP02301 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H3f3cP02301 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H3f3cP02301 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.78□□□□□ -0.2
H3f3cP02301 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
H3f3cP02301 Gm15794-201ENSMUST00000120182 631 ntBASIC13.78□□□□□ -0.2
H3f3cP02301 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.78□□□□□ -0.2
H3f3cP02301 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
H3f3cP02301 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
H3f3cP02301 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
H3f3cP02301 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.78□□□□□ -0.2
H3f3cP02301 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.78□□□□□ -0.2
H3f3cP02301 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H3f3cP02301 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
H3f3cP02301 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
H3f3cP02301 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
H3f3cP02301 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3f3cP02301 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3f3cP02301 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
H3f3cP02301 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3f3cP02301 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.77□□□□□ -0.21
H3f3cP02301 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.77□□□□□ -0.21
H3f3cP02301 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3f3cP02301 Gm27704-201ENSMUST00000185094 107 ntBASIC13.77□□□□□ -0.21
H3f3cP02301 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.77□□□□□ -0.21
H3f3cP02301 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.77□□□□□ -0.21
H3f3cP02301 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.77□□□□□ -0.21
H3f3cP02301 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.77□□□□□ -0.21
H3f3cP02301 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H3f3cP02301 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H3f3cP02301 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3f3cP02301 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3f3cP02301 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H3f3cP02301 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.77□□□□□ -0.21
H3f3cP02301 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
H3f3cP02301 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H3f3cP02301 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H3f3cP02301 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms