Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Gm15427-201ENSMUST00000117288 531 ntBASIC17.44■□□□□ 0.38
Slc6a20bO88575 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.44■□□□□ 0.38
Slc6a20bO88575 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.44■□□□□ 0.38
Slc6a20bO88575 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Gm7787-201ENSMUST00000216858 688 ntBASIC17.44■□□□□ 0.38
Slc6a20bO88575 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc6a20bO88575 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slc6a20bO88575 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Gm8344-201ENSMUST00000119813 856 ntBASIC17.43■□□□□ 0.38
Slc6a20bO88575 Gm9682-201ENSMUST00000197505 556 ntBASIC17.43■□□□□ 0.38
Slc6a20bO88575 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.43■□□□□ 0.38
Slc6a20bO88575 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Slc6a20bO88575 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Gm5745-201ENSMUST00000183748 313 ntBASIC17.42■□□□□ 0.38
Slc6a20bO88575 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a20bO88575 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.41■□□□□ 0.38
Slc6a20bO88575 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.41■□□□□ 0.38
Slc6a20bO88575 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Gm25948-201ENSMUST00000175334 112 ntBASIC17.41■□□□□ 0.38
Slc6a20bO88575 Gm5177-201ENSMUST00000183092 997 ntBASIC17.41■□□□□ 0.38
Slc6a20bO88575 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.41■□□□□ 0.38
Slc6a20bO88575 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a20bO88575 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a20bO88575 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms