Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.75□□□□□ -0.21
Cldn1O88551 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldn1O88551 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.75□□□□□ -0.21
Cldn1O88551 Gm6089-201ENSMUST00000197666 938 ntBASIC13.75□□□□□ -0.21
Cldn1O88551 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Cldn1O88551 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldn1O88551 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.75□□□□□ -0.21
Cldn1O88551 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.75□□□□□ -0.21
Cldn1O88551 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cldn1O88551 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cldn1O88551 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.75□□□□□ -0.21
Cldn1O88551 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cldn1O88551 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.75□□□□□ -0.21
Cldn1O88551 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Cldn1O88551 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.74□□□□□ -0.21
Cldn1O88551 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.74□□□□□ -0.21
Cldn1O88551 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cldn1O88551 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cldn1O88551 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Gm9727-201ENSMUST00000161387 555 ntBASIC13.74□□□□□ -0.21
Cldn1O88551 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.74□□□□□ -0.21
Cldn1O88551 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.74□□□□□ -0.21
Cldn1O88551 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.74□□□□□ -0.21
Cldn1O88551 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cldn1O88551 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cldn1O88551 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.74□□□□□ -0.21
Cldn1O88551 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cldn1O88551 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cldn1O88551 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cldn1O88551 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.73□□□□□ -0.21
Cldn1O88551 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.73□□□□□ -0.21
Cldn1O88551 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.73□□□□□ -0.21
Cldn1O88551 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cldn1O88551 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.73□□□□□ -0.21
Cldn1O88551 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cldn1O88551 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.73□□□□□ -0.21
Cldn1O88551 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.73□□□□□ -0.21
Cldn1O88551 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Cldn1O88551 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cldn1O88551 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms