Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.21■□□□□ 0.03
Tgfbr3O88393 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.21■□□□□ 0.03
Tgfbr3O88393 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tgfbr3O88393 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Tgfbr3O88393 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tgfbr3O88393 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tgfbr3O88393 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tgfbr3O88393 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Tgfbr3O88393 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tgfbr3O88393 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.19■□□□□ 0.02
Tgfbr3O88393 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.19■□□□□ 0.02
Tgfbr3O88393 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.19■□□□□ 0.02
Tgfbr3O88393 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tgfbr3O88393 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tgfbr3O88393 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms