Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.74■□□□□ 0.43
IkbkbO88351 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.74■□□□□ 0.43
IkbkbO88351 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.74■□□□□ 0.43
IkbkbO88351 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.74■□□□□ 0.43
IkbkbO88351 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IkbkbO88351 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
IkbkbO88351 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.73■□□□□ 0.43
IkbkbO88351 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.73■□□□□ 0.43
IkbkbO88351 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IkbkbO88351 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.73■□□□□ 0.43
IkbkbO88351 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IkbkbO88351 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.73■□□□□ 0.43
IkbkbO88351 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IkbkbO88351 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IkbkbO88351 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IkbkbO88351 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
IkbkbO88351 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IkbkbO88351 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IkbkbO88351 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.72■□□□□ 0.43
IkbkbO88351 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.72■□□□□ 0.43
IkbkbO88351 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IkbkbO88351 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IkbkbO88351 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IkbkbO88351 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.72■□□□□ 0.43
IkbkbO88351 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
IkbkbO88351 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.71■□□□□ 0.43
IkbkbO88351 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
IkbkbO88351 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.71■□□□□ 0.43
IkbkbO88351 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
IkbkbO88351 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.71■□□□□ 0.43
IkbkbO88351 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
IkbkbO88351 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.71■□□□□ 0.43
IkbkbO88351 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
IkbkbO88351 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IkbkbO88351 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IkbkbO88351 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
IkbkbO88351 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.7■□□□□ 0.42
IkbkbO88351 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
IkbkbO88351 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IkbkbO88351 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
IkbkbO88351 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IkbkbO88351 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.7■□□□□ 0.42
IkbkbO88351 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
IkbkbO88351 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IkbkbO88351 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms