Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.97■□□□□ 0.31
Pja1O55176 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pja1O55176 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pja1O55176 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Pja1O55176 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.96■□□□□ 0.31
Pja1O55176 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Gm13559-201ENSMUST00000120476 863 ntBASIC16.96■□□□□ 0.31
Pja1O55176 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
Pja1O55176 Gm37055-201ENSMUST00000191866 133 ntBASIC16.96■□□□□ 0.31
Pja1O55176 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.96■□□□□ 0.31
Pja1O55176 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pja1O55176 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.96■□□□□ 0.31
Pja1O55176 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pja1O55176 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pja1O55176 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Pja1O55176 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.95■□□□□ 0.3
Pja1O55176 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pja1O55176 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.95■□□□□ 0.3
Pja1O55176 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.95■□□□□ 0.3
Pja1O55176 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Gm27011-201ENSMUST00000182352 972 ntBASIC16.95■□□□□ 0.3
Pja1O55176 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pja1O55176 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pja1O55176 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.95■□□□□ 0.3
Pja1O55176 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pja1O55176 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.94■□□□□ 0.3
Pja1O55176 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.94■□□□□ 0.3
Pja1O55176 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.94■□□□□ 0.3
Pja1O55176 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
Pja1O55176 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.94■□□□□ 0.3
Pja1O55176 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pja1O55176 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pja1O55176 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pja1O55176 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pja1O55176 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pja1O55176 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Pja1O55176 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pja1O55176 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.93■□□□□ 0.3
Pja1O55176 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pja1O55176 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pja1O55176 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pja1O55176 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pja1O55176 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Pja1O55176 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pja1O55176 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.92■□□□□ 0.3
Pja1O55176 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.92■□□□□ 0.3
Pja1O55176 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.92■□□□□ 0.3
Pja1O55176 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.92■□□□□ 0.3
Pja1O55176 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.92■□□□□ 0.3
Pja1O55176 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pja1O55176 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms