Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Trdmt1O55055 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trdmt1O55055 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.62■□□□□ 0.41
Trdmt1O55055 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.62■□□□□ 0.41
Trdmt1O55055 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trdmt1O55055 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Trdmt1O55055 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trdmt1O55055 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.61■□□□□ 0.41
Trdmt1O55055 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Chchd1-203ENSMUST00000224633 557 ntBASIC17.61■□□□□ 0.41
Trdmt1O55055 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.61■□□□□ 0.41
Trdmt1O55055 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.61■□□□□ 0.41
Trdmt1O55055 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trdmt1O55055 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trdmt1O55055 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
Trdmt1O55055 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.6■□□□□ 0.41
Trdmt1O55055 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.6■□□□□ 0.41
Trdmt1O55055 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.6■□□□□ 0.41
Trdmt1O55055 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trdmt1O55055 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trdmt1O55055 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.59■□□□□ 0.41
Trdmt1O55055 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Trdmt1O55055 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Trdmt1O55055 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trdmt1O55055 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trdmt1O55055 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.58■□□□□ 0.41
Trdmt1O55055 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms