Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Per1O35973 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.38■□□□□ 0.37
Per1O35973 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Per1O35973 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Per1O35973 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.38■□□□□ 0.37
Per1O35973 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.38■□□□□ 0.37
Per1O35973 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Per1O35973 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.37■□□□□ 0.37
Per1O35973 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.37■□□□□ 0.37
Per1O35973 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.37■□□□□ 0.37
Per1O35973 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Per1O35973 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Per1O35973 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Per1O35973 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.36■□□□□ 0.37
Per1O35973 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Per1O35973 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Per1O35973 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Per1O35973 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Per1O35973 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.36■□□□□ 0.37
Per1O35973 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.36■□□□□ 0.37
Per1O35973 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Per1O35973 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.36■□□□□ 0.37
Per1O35973 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Per1O35973 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Per1O35973 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Per1O35973 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.35■□□□□ 0.37
Per1O35973 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.35■□□□□ 0.37
Per1O35973 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.35■□□□□ 0.37
Per1O35973 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Per1O35973 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Per1O35973 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Per1O35973 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.34■□□□□ 0.37
Per1O35973 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Per1O35973 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Per1O35973 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Per1O35973 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Per1O35973 Gm8344-201ENSMUST00000119813 856 ntBASIC17.34■□□□□ 0.37
Per1O35973 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.34■□□□□ 0.37
Per1O35973 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.34■□□□□ 0.37
Per1O35973 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.34■□□□□ 0.37
Per1O35973 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Per1O35973 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms