Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Slc1a6O35544 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Slc1a6O35544 Gm29707-201ENSMUST00000196325 491 ntBASIC15.85■□□□□ 0.13
Slc1a6O35544 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.85■□□□□ 0.13
Slc1a6O35544 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.85■□□□□ 0.13
Slc1a6O35544 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Slc1a6O35544 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Slc1a6O35544 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc1a6O35544 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Slc1a6O35544 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.84■□□□□ 0.13
Slc1a6O35544 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc1a6O35544 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc1a6O35544 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Slc1a6O35544 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Slc1a6O35544 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc1a6O35544 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc1a6O35544 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Slc1a6O35544 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc1a6O35544 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc1a6O35544 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc1a6O35544 Gm21814-202ENSMUST00000203277 873 ntBASIC15.83■□□□□ 0.12
Slc1a6O35544 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Slc1a6O35544 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc1a6O35544 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Slc1a6O35544 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc1a6O35544 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slc1a6O35544 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.82■□□□□ 0.12
Slc1a6O35544 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.82■□□□□ 0.12
Slc1a6O35544 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.82■□□□□ 0.12
Slc1a6O35544 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc1a6O35544 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms