Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Pkd1O08852 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.08□□□□□ -0.8
Pkd1O08852 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Gm29541-201ENSMUST00000191351 678 ntBASIC10.08□□□□□ -0.8
Pkd1O08852 Gm38294-201ENSMUST00000192831 381 ntBASIC10.08□□□□□ -0.8
Pkd1O08852 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.08□□□□□ -0.8
Pkd1O08852 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.08□□□□□ -0.8
Pkd1O08852 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.08□□□□□ -0.8
Pkd1O08852 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Rarb-207ENSMUST00000225921 2756 ntBASIC10.08□□□□□ -0.8
Pkd1O08852 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.08□□□□□ -0.8
Pkd1O08852 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.08□□□□□ -0.8
Pkd1O08852 Gm27680-201ENSMUST00000184192 160 ntBASIC10.08□□□□□ -0.8
Pkd1O08852 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.08□□□□□ -0.8
Pkd1O08852 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Pkd1O08852 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Pkd1O08852 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.07□□□□□ -0.8
Pkd1O08852 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.07□□□□□ -0.8
Pkd1O08852 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.07□□□□□ -0.8
Pkd1O08852 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Pkd1O08852 Mir7684-201ENSMUST00000183858 60 ntBASIC10.07□□□□□ -0.8
Pkd1O08852 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.07□□□□□ -0.8
Pkd1O08852 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pkd1O08852 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Pkd1O08852 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.07□□□□□ -0.8
Pkd1O08852 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.07□□□□□ -0.8
Pkd1O08852 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.07□□□□□ -0.8
Pkd1O08852 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.07□□□□□ -0.8
Pkd1O08852 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm18766-201ENSMUST00000189811 808 ntBASIC10.07□□□□□ -0.8
Pkd1O08852 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Pkd1O08852 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.07□□□□□ -0.8
Pkd1O08852 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Pkd1O08852 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Gm13015-201ENSMUST00000118674 204 ntBASIC10.06□□□□□ -0.8
Pkd1O08852 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.06□□□□□ -0.8
Pkd1O08852 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pkd1O08852 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Pkd1O08852 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.06□□□□□ -0.8
Pkd1O08852 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pkd1O08852 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
Pkd1O08852 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pkd1O08852 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pkd1O08852 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms