Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.43■□□□□ 0.22
Ercc2O08811 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.43■□□□□ 0.22
Ercc2O08811 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.43■□□□□ 0.22
Ercc2O08811 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ercc2O08811 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ercc2O08811 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ercc2O08811 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.42■□□□□ 0.22
Ercc2O08811 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.42■□□□□ 0.22
Ercc2O08811 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.42■□□□□ 0.22
Ercc2O08811 Gm27357-201ENSMUST00000183754 135 ntBASIC16.42■□□□□ 0.22
Ercc2O08811 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.42■□□□□ 0.22
Ercc2O08811 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Gm7367-201ENSMUST00000057611 492 ntBASIC16.42■□□□□ 0.22
Ercc2O08811 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ercc2O08811 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ercc2O08811 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ercc2O08811 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ercc2O08811 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.41■□□□□ 0.22
Ercc2O08811 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.41■□□□□ 0.22
Ercc2O08811 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
Ercc2O08811 Mir6404-201ENSMUST00000183699 94 ntBASIC16.41■□□□□ 0.22
Ercc2O08811 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.41■□□□□ 0.22
Ercc2O08811 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.41■□□□□ 0.22
Ercc2O08811 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ercc2O08811 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Ercc2O08811 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ercc2O08811 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ercc2O08811 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ercc2O08811 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.4■□□□□ 0.22
Ercc2O08811 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.4■□□□□ 0.22
Ercc2O08811 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.4■□□□□ 0.22
Ercc2O08811 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ercc2O08811 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Ercc2O08811 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ercc2O08811 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ercc2O08811 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.39■□□□□ 0.21
Ercc2O08811 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.39■□□□□ 0.21
Ercc2O08811 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.39■□□□□ 0.21
Ercc2O08811 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ercc2O08811 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms