Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Tcof1O08784 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.75■□□□□ 0.59
Tcof1O08784 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Tcof1O08784 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Tcof1O08784 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Tcof1O08784 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.74■□□□□ 0.59
Tcof1O08784 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.74■□□□□ 0.59
Tcof1O08784 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.74■□□□□ 0.59
Tcof1O08784 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tcof1O08784 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcof1O08784 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tcof1O08784 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tcof1O08784 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Gm11452-201ENSMUST00000122376 690 ntBASIC18.73■□□□□ 0.59
Tcof1O08784 AW822252-206ENSMUST00000208904 237 ntBASIC18.73■□□□□ 0.59
Tcof1O08784 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tcof1O08784 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcof1O08784 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.72■□□□□ 0.59
Tcof1O08784 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.72■□□□□ 0.59
Tcof1O08784 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.72■□□□□ 0.59
Tcof1O08784 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Tcof1O08784 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.72■□□□□ 0.59
Tcof1O08784 Gm6296-201ENSMUST00000222599 943 ntBASIC18.72■□□□□ 0.59
Tcof1O08784 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.72■□□□□ 0.59
Tcof1O08784 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.72■□□□□ 0.59
Tcof1O08784 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcof1O08784 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Tcof1O08784 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcof1O08784 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcof1O08784 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.71■□□□□ 0.59
Tcof1O08784 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tcof1O08784 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tcof1O08784 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcof1O08784 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcof1O08784 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcof1O08784 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Tcof1O08784 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Tcof1O08784 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Tcof1O08784 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.71■□□□□ 0.59
Tcof1O08784 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.71■□□□□ 0.59
Tcof1O08784 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tcof1O08784 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Tcof1O08784 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Tcof1O08784 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tcof1O08784 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.71■□□□□ 0.59
Tcof1O08784 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Tcof1O08784 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms