Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AlyrefO08583 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
AlyrefO08583 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
AlyrefO08583 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.19■□□□□ 0.18
AlyrefO08583 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Gm25948-201ENSMUST00000175334 112 ntBASIC16.19■□□□□ 0.18
AlyrefO08583 Gm29791-202ENSMUST00000207888 369 ntBASIC16.19■□□□□ 0.18
AlyrefO08583 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AlyrefO08583 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
AlyrefO08583 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
AlyrefO08583 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AlyrefO08583 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.18■□□□□ 0.18
AlyrefO08583 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AlyrefO08583 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
AlyrefO08583 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.18■□□□□ 0.18
AlyrefO08583 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AlyrefO08583 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
AlyrefO08583 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.18■□□□□ 0.18
AlyrefO08583 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
AlyrefO08583 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.17■□□□□ 0.18
AlyrefO08583 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Gm7653-201ENSMUST00000214567 508 ntBASIC16.17■□□□□ 0.18
AlyrefO08583 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.17■□□□□ 0.18
AlyrefO08583 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.17■□□□□ 0.18
AlyrefO08583 Gm25857-201ENSMUST00000082788 129 ntBASIC16.17■□□□□ 0.18
AlyrefO08583 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.17■□□□□ 0.18
AlyrefO08583 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AlyrefO08583 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AlyrefO08583 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
AlyrefO08583 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Gm44335-201ENSMUST00000196879 141 ntBASIC16.16■□□□□ 0.18
AlyrefO08583 Gm44297-201ENSMUST00000198304 141 ntBASIC16.16■□□□□ 0.18
AlyrefO08583 Gm44346-201ENSMUST00000198851 141 ntBASIC16.16■□□□□ 0.18
AlyrefO08583 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.16■□□□□ 0.18
AlyrefO08583 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.16■□□□□ 0.18
AlyrefO08583 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.16■□□□□ 0.18
AlyrefO08583 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.16■□□□□ 0.18
AlyrefO08583 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.16■□□□□ 0.18
AlyrefO08583 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
AlyrefO08583 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AlyrefO08583 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AlyrefO08583 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
AlyrefO08583 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AlyrefO08583 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AlyrefO08583 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms