Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Gm22697-201ENSMUST00000175194 63 ntBASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Gm37722-201ENSMUST00000193757 208 ntBASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm21788J3QNH3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Gm11355-201ENSMUST00000121120 306 ntBASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm21788J3QNH3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm6433-201ENSMUST00000118634 875 ntBASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm15565-201ENSMUST00000118890 427 ntBASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm21788J3QNH3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm21788J3QNH3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm21788J3QNH3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm21788J3QNH3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm21788J3QNH3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm21788J3QNH3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Gm21788J3QNH3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.55□□□□□ -0.24
Gm21788J3QNH3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms