Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh9F8VPK8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh9F8VPK8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh9F8VPK8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh9F8VPK8 App-207ENSMUST00000227737 2827 ntBASIC16.46■□□□□ 0.22
Pcdh9F8VPK8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Gm10231-201ENSMUST00000181584 441 ntBASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Gm37722-201ENSMUST00000193757 208 ntBASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Gm10175-202ENSMUST00000208752 441 ntBASIC16.45■□□□□ 0.22
Pcdh9F8VPK8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms