Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ube4aE9Q735 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Gm6736-201ENSMUST00000166583 948 ntBASIC19.23■□□□□ 0.67
Ube4aE9Q735 Gm45167-201ENSMUST00000208007 322 ntBASIC19.23■□□□□ 0.67
Ube4aE9Q735 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ube4aE9Q735 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Gm19164-201ENSMUST00000210667 640 ntBASIC19.22■□□□□ 0.67
Ube4aE9Q735 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.22■□□□□ 0.67
Ube4aE9Q735 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.22■□□□□ 0.67
Ube4aE9Q735 Gm10175-201ENSMUST00000086013 645 ntBASIC19.22■□□□□ 0.67
Ube4aE9Q735 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ube4aE9Q735 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Mir8117-201ENSMUST00000184773 107 ntBASIC19.21■□□□□ 0.67
Ube4aE9Q735 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ube4aE9Q735 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Ube4aE9Q735 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Ube4aE9Q735 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.2■□□□□ 0.66
Ube4aE9Q735 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Gm4899-201ENSMUST00000178708 719 ntBASIC19.2■□□□□ 0.66
Ube4aE9Q735 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Gm43575-201ENSMUST00000196420 516 ntBASIC19.2■□□□□ 0.66
Ube4aE9Q735 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ube4aE9Q735 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.19■□□□□ 0.66
Ube4aE9Q735 Gm25925-201ENSMUST00000158314 306 ntBASIC19.19■□□□□ 0.66
Ube4aE9Q735 Gm24513-201ENSMUST00000174964 138 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms