Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85cE9Q6B2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85cE9Q6B2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc85cE9Q6B2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85cE9Q6B2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85cE9Q6B2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc85cE9Q6B2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85cE9Q6B2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Gm18057-201ENSMUST00000208220 503 ntBASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85cE9Q6B2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Gm12490-201ENSMUST00000120255 560 ntBASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Gm7730-201ENSMUST00000212486 454 ntBASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85cE9Q6B2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Gm7488-201ENSMUST00000117148 684 ntBASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85cE9Q6B2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85cE9Q6B2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85cE9Q6B2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85cE9Q6B2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc85cE9Q6B2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc85cE9Q6B2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85cE9Q6B2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms